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Ignore whitespace Rev 40 → Rev 47

/sipmScan/src/analysisBias.cpp
103,7 → 103,7
 
int analysisBias(char* dfile0="test", int dbg=0, double tdcCut=5.0)
{
const double c_tdcOffset = 368*TDC_BIN; // ns
const double c_tdcOffset = 372*TDC_BIN; // ns, SiPM4
printf(" Data to root conversion program\nUsage:\nd2r(input file name <without.dat>, debug on/off, TDC cut +-[ns])\n\n");
/sipmScan/src/RTUtil.cpp
1,5 → 1,6
//##########################################################################################
#include "TGaxis.h"
#include "TColor.h"
 
void RTSetStyle(TStyle *style)
{
19,12 → 20,12
style->SetOptStat("e");
style->SetOptFit(1);
style->SetPadTopMargin(0.12);
style->SetPadTopMargin(0.10);
style->SetPadBottomMargin(0.12);
style->SetPadLeftMargin(0.12);
style->SetPadRightMargin(0.12);
style->SetPadRightMargin(0.15);
style->SetTitleOffset(1.3, "y");
style->SetTitleOffset(1.5, "y");
style->SetPalette(1, 0);
style->SetPaperSize(TStyle::kA4);
87,6 → 88,17
{
can->Update();
}
 
void SetGS()
{
const Int_t Number = 2;
Double_t Red[Number] = {1.0, 0.0};
Double_t Green[Number] = {1.0, 0.0};
Double_t Blue[Number] = {1.0, 0.0};
Double_t Stops[Number] = {0.0, 1.0};
Int_t nb = 50;
TColor::CreateGradientColorTable(Number, Stops, Red, Green, Blue, nb);
}
//##########################################################################################
 
 
/sipmScan/src/analysisScan.cpp
30,8 → 30,8
#define NCH 64
#define TDC_BIN 1.0416 // 1 TDC bin in ns
#define MIKRO_BIN 0.49609/1000. //1 mikro step in mm; stage MM3MF
#define OFFSETX 15400 // Right edge of SiPM+Lightguide
#define OFFSETY 6400 // Lower edge of SiPM+Lightguide
#define OFFSETX 5220 // Right edge of SiPM+Lightguide
#define OFFSETY 5860 // Lower edge of SiPM+Lightguide
 
#define RUNREC_ID 1
#define ENDREC_ID 2
91,8 → 91,7
int analysisScan(char* dfile0="test", int dbg=0, double tdcCut=5.0)
{
 
const double c_tdcOffset = +368*TDC_BIN; // ns
const double c_tdcOffset = +96*TDC_BIN; // ns, SiPM4
printf(" Data to root conversion program\nUsage:\nd2r(input file name <without .dat>, debug on/off, TDC cut +-[ns])\n\n");
printf(" OFFSETS: \n x: %d\n y: %d\n t:%f\n", OFFSETX, OFFSETY, c_tdcOffset);
/sipmScan/examples/plot_tdc_C.dll
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/sipmScan/examples/plot_tdc_C.rootmap
File deleted
/sipmScan/examples/plot_tdc_C.d
File deleted
/sipmScan/examples/plot_tdc_C.exp
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/sipmScan/examples/plot_tdc_C.lib
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/sipmScan/examples/plot_tdc_C.def
File deleted
/sipmScan/examples/focus.C
0,0 → 1,70
#include "TROOT.h"
#include "TFile.h"
#include "TBenchmark.h"
#include "TH1F.h"
#include "TH2F.h"
#include "TCanvas.h"
#include "TStyle.h"
#include "TPad.h"
#include "TPaveText.h"
//#include "TLabel.h"
#include "TF1.h"
#include "TGraph.h"
#include "TSpectrum.h"
#include "stdio.h"
 
#include "include/RTUtil.h"
 
int focus(char filename[256] = "test", int chX=3, int chY=2, double parameter1=16.90, double parameter2=17.20, bool debug = false)
{
const int c_nChannels = 64;
int map[8][8]={{32,34,53,55,40,42,61,63},
{48,50,37,39,56,58,45,47},
{33,35,52,54,41,43,60,62},
{49,51,36,38,57,59,44,46},
{17,19,4,6,25,27,12,14},
{1,3,20,22,9,11,28,30},
{16,18,5,7,24,26,13,15},
{0,2,21,23,8,10,29,31}
};
char fnameroot[256];
TFile* rootfile;
sprintf(fnameroot, "root/%s.root", filename);
rootfile = (TFile *) gROOT->FindObject(filename);
if(rootfile==NULL) rootfile = new TFile(fnameroot);
if(rootfile==NULL) {
printf("Cannot open root file %s!!!\n",fnameroot);
return(0);
}
 
// set draw style
RTSetStyle(gStyle);
 
/** Draws the beam profile and fits it with error function
* on some background function
*/
TCanvas* canvas9 = new TCanvas("canvas9","canvas9", 500,500);
canvas9->cd();
char hname[128];
int channel = map[chX][chY];
sprintf(hname, "hnhitsx%d", channel);
TH1F* h_laser = (TH1F*)rootfile->Get(hname);
h_laser->Draw();
h_laser->SetStats(1);
TF1* err = new TF1("err","[0]+[1]*TMath::Erf((x-[2])/[3])",parameter1,parameter2);
err->SetParameter(0,2500);
err->SetParameter(1, h_laser->GetMaximum());
err->SetParameter(2, h_laser->GetBinCenter(h_laser->GetMaximumBin()));
err->SetParameter(3, 0.001);
h_laser->Fit(err,"qr");
h_laser->Fit(err,"lr");
double sigma = err->GetParameter(3);
printf("sigma = %2.0f um, FWHM = %2.0f um\n", sigma*1000, 2.35*sigma*1000);
return 0;
}
/sipmScan/examples/sipm.C
6,6 → 6,8
#include "TCanvas.h"
#include "TStyle.h"
#include "TPad.h"
#include "TPaveText.h"
//#include "TLabel.h"
#include "TF1.h"
#include "TGraph.h"
#include "TSpectrum.h"
15,11 → 17,9
 
double getNoise(TH2F*, int, int);
 
int sipm(char filename[256] = "test", char plopt[256]="all", int chXstart=0, int chXend=7, int chYstart=0, int chYend=7, bool debug = false)
int sipm(char filename[256] = "test", char plopt[256]="all", int parameter1=0, int parameter2=7, int chYstart=0, int chYend=7, bool debug = false)
{
const int c_nChannels = 64;
const double c_xOffset = 0; // mm
const double c_yOffset = 0;
int map[8][8]={{32,34,53,55,40,42,61,63},
{48,50,37,39,56,58,45,47},
43,6 → 43,16
 
// set draw style
RTSetStyle(gStyle);
// Print results to .pdf (option "p")
if(strstr(plopt, "p") != NULL) {
TCanvas* canvasFirst = new TCanvas("canvasFirst","",500,500);
TPaveText* text = new TPaveText(.05,.1,.95,.8);
text->AddText("SiPM Scan results");
canvasFirst->cd();
text->Draw();
canvasFirst->Print("result.pdf(");
}
if( strstr(plopt, "all") != NULL ) {
TCanvas *canvas2 = new TCanvas("canvas2","Hits x;;",2000,2000);
68,10 → 78,16
TCanvas *canvas10 = new TCanvas("canvas10","Ch x;;",500,500);
TH1F* h_hitsx;
canvas10->cd();
int chPosition = map[parameter1][parameter2];
char hname[128];
sprintf(hname, "hnhitsx%d", chXstart);
sprintf(hname, "hnhitsx%d", chPosition);
h_hitsx = (TH1F*)rootfile->Get(hname);
h_hitsx->Draw();
h_hitsx->Draw();
if(strstr(plopt, "p") != NULL) {
canvas10->Print("result.pdf");
}
}
if( strstr(plopt, "y") != NULL ) {
78,10 → 94,15
TCanvas *canvas11 = new TCanvas("canvas11","Ch x;;",500,500);
TH1F* h_hitsy;
canvas11->cd();
int chPosition = map[parameter1][parameter2];
char hname[128];
sprintf(hname, "hnhitsy%d", chXstart);
sprintf(hname, "hnhitsy%d", chPosition);
h_hitsy = (TH1F*)rootfile->Get(hname);
h_hitsy->Draw();
if(strstr(plopt, "p") != NULL) {
canvas11->Print("result.pdf");
}
}
if( strstr(plopt, "share") != NULL ) {
102,7 → 123,7
TCanvas *canvas4 = new TCanvas("canvas4","canvas4",500,500);
canvas4->cd();
for(int i=chXstart; i<=chXend; i++) {
for(int i=parameter1; i<=parameter2; i++) {
TH1F* h_hitsx;
char hname[128];
int chPosition = map[i][chYstart];
111,7 → 132,7
h_hitsx->SetTitle("Scan X;x [mm]; Entries");
h_hitsx->GetYaxis()->SetTitleOffset(1.3);
h_hitsx->SetStats(0);
if (i == chXstart)
if (i == parameter1)
h_hitsx->Draw();
else {
h_hitsx->SetLineColor(i+1);
126,7 → 147,7
for(int i=chYstart; i<=chYend; i++) {
TH1F* h_hitsy;
char hname[128];
int chPosition = map[chXstart][i];
int chPosition = map[parameter1][i];
sprintf(hname, "hnhitsy%d", chPosition);
h_hitsy = (TH1F*)rootfile->Get(hname);
h_hitsy->SetTitle("Scan Y;y [mm]; Entries");
153,12 → 174,12
// Get the filled histogram from scan
TH1F* h_x;
char name[32];
sprintf(name, "hnhitsx%d", chXstart);
sprintf(name, "hnhitsx%d", parameter1);
h_x = (TH1F*)rootfile->Get(name);
h_x->DrawCopy();
TH1F* h_y;
sprintf(name, "hnhitsy%d", chXstart);
sprintf(name, "hnhitsy%d", parameter1);
h_y = (TH1F*)rootfile->Get(name);
// Create and fill corrected histogram
229,7 → 250,7
h_line[j] = new TH1F("h_line", "h_line", binsX, xLowUser, xUpUser);
}
for(int j=chXstart; j<=chXend; j++) {
for(int j=parameter1; j<=parameter2; j++) {
int chPosition = map[j][chYstart];
char hname[128];
sprintf(hname, "h2d%d", chPosition);
245,10 → 266,10
double eta = -log(1 - signal);
double x = xLowUser + k*(xUpUser-xLowUser)/double(binsX);
//double y = l*(yUpUser-yLowUser)/double(binsY);
h_line[j]->Fill(x-c_xOffset, signal);
h_line[j]->Fill(x, signal);
//}
}
if (j == chXstart) {
if (j == parameter1) {
h_line[j]->SetTitle("SiPM#2 w/o noise subtraction;x[mm];Hits");
//h_line[j]->GetYaxis()->SetRangeUser(-0.05, 0.3);
//h_line[j]->GetYaxis()->SetRangeUser(-50, 2500);
265,9 → 286,9
TCanvas* canvas61 = new TCanvas("canvas61","canvas61",8*200,300);
canvas61->cd();
TH2F* h_corrected = new TH2F("h_corrected","h_corrected",binsX,xLowUser,xUpUser, binsY,yLowUser,yUpUser);
for(int i=chXstart; i<=chXend; i++) {
//int canvasPosition = nX*(i-chYstart)+(j-chXstart)+1;
//int canvasPosition = nX*(chYend-i)+chXstart+1;
for(int i=parameter1; i<=parameter2; i++) {
//int canvasPosition = nX*(i-chYstart)+(j-parameter1)+1;
//int canvasPosition = nX*(chYend-i)+parameter1+1;
//if (debug) printf("canvas %d\n",canvasPosition);
int chPosition = map[i][chYstart];
char hname[128];
292,7 → 313,7
//double y = l*(yUpUser-yLowUser)/double(binsY);
double x = h[histogram]->GetXaxis()->GetBinCenter(k);
double y = h[histogram]->GetYaxis()->GetBinCenter(l);
h_corrected->Fill(x-c_xOffset, y-c_yOffset, eta);
h_corrected->Fill(x, y, eta);
}
}
}
315,10 → 336,10
TCanvas* canvas7 = new TCanvas("canvas7","canvas7", nX*400,nY*400);
printf("nx %d ny %d\n",nX,nY);
canvas7->Divide(nX,nY);
for(int i=chXend-1; i<=chXend+1; i++) {
for(int j=chXstart-1; j<=chXstart+1; j++) {
//int canvasPosition = nX*(i-chYstart)+(j-chXstart)+1;
int canvasPosition = nX*(chXend+1-i) + (j-chXstart+1) +1;
for(int i=parameter2-1; i<=parameter2+1; i++) {
for(int j=parameter1-1; j<=parameter1+1; j++) {
//int canvasPosition = nX*(i-chYstart)+(j-parameter1)+1;
int canvasPosition = nX*(parameter2+1-i) + (j-parameter1+1) +1;
if (debug) printf("canvas %d\n",canvasPosition);
canvas7->cd(canvasPosition);
char hname[128];
334,7 → 355,7
canvas8->cd();
gStyle->SetOptStat(0);
char hname[128];
int chPosition = map[chXstart][chXend];
int chPosition = map[parameter1][parameter2];
sprintf(hname, "h2d%d", chPosition);
TH2F* h_2d = (TH2F*)rootfile->Get(hname);
 
350,6 → 371,9
Double_t yUpUser = h_2d->GetYaxis()->GetXmax();
if (debug) printf("xLow %f xUp %f\n",xLowUser,xUpUser);
TH2F* h_corrected = new TH2F("h_corrected","h_corrected",binsX, xLowUser, xUpUser, binsY, yLowUser, yUpUser);
double diffX = xUpUser - xLowUser;
double diffY = yUpUser - yLowUser;
//TH2F* h_corrected = new TH2F("h_corrected","h_corrected",binsX, 3.00, 3.00+diffX, binsY, 8.00, 8.00+diffY);
//TH2F* h_corrected = new TH2F("h_corrected","h_corrected",binsX, minX, maxX, binsY, minY, maxY);
double noise = getNoise(h_2d, 1, 70);
359,24 → 383,28
double signal = h_2d->GetBinContent(k,j); // detected
//double p = ((signal - noise) > 1) ? (signal-noise) : 1;
double p = signal - noise;
p /= 10000.;
/*
p /= 1000.;
double p0 = 1.0 - p; // events with zero photons
//double eta = (-log(p0) * p0 ) / (1-p0-0.00001);
double eta = -log(p0); // constant of the poissonian statistics
if (debug) printf("p=%f p0=%f log(p0)=%f eta=%f\n",p,p0,log(p0),eta);
*/
//double x = xLowUser + k*(xUpUser - xLowUser) / double(binsX);
double x = h_2d->GetXaxis()->GetBinCenter(k);
//double y = yLowUser + j*(yUpUser-yLowUser)/double(binsY);
double y = h_2d->GetYaxis()->GetBinCenter(j);
if (debug) printf("x=%f y=%f\n", x, y);
h_corrected->Fill(x + c_xOffset, y + c_yOffset, eta);
h_corrected->Fill(x, y, p);
}
}
h_corrected->SetTitle("n_pe = - ln P(0);x[mm];y[mm]");
//h_corrected->SetTitle(";x[mm];y[mm]");
gStyle->SetPalette(52,0);
h_corrected->GetZaxis()->SetRangeUser(-0.05,0.7);
h_corrected->SetContour(50);
//h_corrected->SetTitle("n_pe = - ln P(0);x[mm];y[mm]");
h_corrected->SetTitle(";x[mm];y[mm]");
//gStyle->SetPalette(52,0); // black and white for print
//h_corrected->GetZaxis()->SetRangeUser(-0.05,1);
//h_corrected->SetContour(100);
//gStyle->SetPalette(1);
//SetGS();
h_corrected->Draw("colz");
// collection efficiency
391,6 → 419,11
}
}
printf("Signal sum = %f\n # of points = %d\n",efficiency,nPoints);
if(strstr(plopt, "p") != NULL) {
canvas8->Print("result.pdf");
}
}
/** Draws the sum of channel signals
398,7 → 431,7
* Suitable for 8x8 chs scan
*/
if( strstr(plopt, "sum") != NULL ) {
int nX = chXend - chXstart + 1;
int nX = parameter2 - parameter1 + 1;
int nY = chYend - chYstart + 1;
TCanvas* canvas12 = new TCanvas("canvas12","c2",8*200, 8*200);
canvas12->cd();
422,11 → 455,11
// 2d histogram noise subtraction and poisson scaling
for(int i=chYstart; i<=chYend; i++) {
for(int j=chXstart; j<=chXend; j++) {
for(int j=parameter1; j<=parameter2; j++) {
int chPosition = map[j][i];
char hname[128];
sprintf(hname, "h2d%d", chPosition);
int histogram = nX*(i-chYstart)+(j-chXstart);
int histogram = nX*(i-chYstart)+(j-parameter1);
h[histogram] = (TH2F *) rootfile->Get(hname);
int noise = getNoise(h[histogram], 1, 170);
if (debug) printf("noise: %d\n",noise);
442,7 → 475,7
//printf("p=%f p0=%f log(p0)=%f eta=%f\n",p,p0,log(p0),eta);
double x = k*(xUpUser-xLowUser)/double(binsX);
double y = l*(yUpUser-yLowUser)/double(binsY);
h_corrected->Fill(x-c_xOffset, y-c_yOffset, eta);
h_corrected->Fill(x, y, eta);
}
}
469,12 → 502,12
TCanvas* canvas9 = new TCanvas("canvas9","canvas9", 500,500);
canvas9->cd();
char hname[128];
sprintf(hname, "hnhitsx%d", 36);
sprintf(hname, "hnhitsx%d", 49);
TH1F* h_laser = (TH1F*)rootfile->Get(hname);
h_laser->Draw();
h_laser->SetStats(1);
TF1* err = new TF1("err","[0]+[1]*TMath::Erf((x-[2])/[3])",17.02,17.30);
TF1* err = new TF1("err","[0]+[1]*TMath::Erf((x-[2])/[3])",parameter1,parameter2);
err->SetParameter(0,2500);
err->SetParameter(1, h_laser->GetMaximum());
err->SetParameter(2, h_laser->GetBinCenter(h_laser->GetMaximumBin()));
500,6 → 533,12
gStyle->SetOptStat(0);
h_map->Draw("text");
}
if(strstr(plopt, "p") != NULL) {
TCanvas* canvasLast = new TCanvas("canvasLast","",500,500);
canvasLast->Print("result.pdf)");
}
return(0);
}
/sipmScan/examples/tdc.C
65,11 → 65,13
canvas1->cd();
htdc->Draw("colz");
TH3F* h_3D = (TH3F*) rootfile->Get("h_correctedTDC");
//TH3F* h_3D = (TH3F*) rootfile->Get("h_correctedTDC");
TH2F* h_correctedTDC = (TH2F*) rootfile->Get("h_correctedTDC");
TCanvas* canvas2 = new TCanvas("canvas2","canvas2",800,800);
canvas2->cd();
//h_correctedTDC->Draw("colz");
h_correctedTDC->Draw("colz");
/*
TH2D* h_correctedTDC = (TH2D*) h_3D->Project3D("xz");
h_correctedTDC->SetTitle("; t [ns]; Channel");
h_correctedTDC->Draw("colz");
77,6 → 79,7
canvas2->cd(2);
TH1D* h_allTDCbins = h_correctedTDC->ProjectionX("", 1, 64);
h_allTDCbins->Draw();
*/
/*
int binY = map[chX][chY];
TH1D* channelY = h_correctedTDC->ProjectionX("",binY+1,binY+1);